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49ers quarterback Colin Kaepernick, tight end Vernon Davis work overtime to find timing

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    San Francisco 49ers quarterback Colin Kaepernick (7) and New England Patriots quarterback Tom Brady (12) meet at midfield after their NFL football game in Foxborough, Mass., Monday, Dec. 17, 2012. The 49ers won 41-34. (AP Photo/Steven Senne) (The Associated Press)

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    San Francisco 49ers quarterback Colin Kaepernick (7) runs against the New England Patriots in the second quarter of an NFL football game in Foxborough, Mass., Sunday, Dec. 16, 2012. (AP Photo/Steven Senne) (The Associated Press)

Vernon Davis had a cross-country flight and an entire off day to think about the touchdown that should have been.

Colin Kaepernick overthrew the tight end on a would-be 34-yard score during the first quarter of Sunday's 41-34 victory at New England.

Davis acknowledges he is still getting used to Kaepernick, who is 4-1 since becoming the starter in place of Alex Smith and earned NFC Offensive Player of the Week honors after the upset of the Patriots.

From gauging the zip on the ball after its release to learning the tendencies of the strong-armed Kaepernick and finding their timing together, Davis said he believes things will soon start clicking.